Jahr
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Titel der Publikation
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Publikationsart
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Publikationsform
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2022
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Attention retrieval model for entity relation extraction from biological literature |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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Computational models for clinical applications in personalized medicine |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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Cross-tissue transcriptome-wide association studies identify susceptibility genes shared between schizophrenia and inflammatory bowel disease |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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Hamiltonian cycles in annular decomposable Barnette graphs |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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Monitoring the maturation of the sarcomere network |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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A new perspective on teaching the natural exponential to engineering students |
Zeitschriftenartikel
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Elektronische Ressource
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2022
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The prognostic and predictive role of xeroderma pigmentosum gene expression in Melanoma |
Zeitschriftenartikel
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Elektronische Ressource
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2021
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Personalized cell therapy for patients with peripheral arterial diseases in the context of genetic alterations |
Zeitschriftenartikel
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Elektronische Ressource
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2019
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Harmonizing semantic annotations for computational models in biology |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Diagnostic potential of imaging flow cytometry |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Evolution of computational models in BioModels Database and the Physiome Model Repository |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Identifying frequent patterns in biochemical reaction networks: a workflow: Database : the journal of biological databases and curation, ISSN 1758-0463, ZDB-ID 2496706-3. - Oxford : Oxford University Press |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Impact of graphene-based nanomaterials (GBNMs) on the structural and functional conformations of hepcidin peptide |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Mathematical analysis of the influence of brain metabolism on the BOLD signal in Alzheimer's disease |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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MiR-205-5p and miR-342-3p cooperate in the repression of the E2F1 transcription factor in the context of anticancer chemotherapy resistance |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Model-based phenotypic signatures governing the dynamics of the stem and semi-differentiated cell populations in dysplastic colonic crypts: Bulletin of mathematical biology, ISSN 1522-9602, ZDB-ID 1462512-x. - New York, NY : Springer |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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A network-based integrative workflow to unravel mechanisms underlying disease progression |
Teil einer Monographie/eines Konferenzbandes
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Elektronische Ressource
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2018
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Quick tips for creating effective and impactful biological pathways using the Systems Biology Graphical Notation |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3) |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Specifications of standards in systems and synthetic biology: status and developments in 2017 |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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A systematic survey of centrality measures for protein-protein interaction networks: BMC systems biology, ISSN 1752-0509, ZDB-ID 2265490-2. - London : BioMed Central |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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The Systems Biology Markup Language (SBML) |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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The Systems Biology Markup Language (SBML): language specification for level 3 version 1 core |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Unveiling network-based functional features through integration of gene expression into protein networks |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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A web platform for the network analysis of high-throughput data in melanoma and its use to investigate mechanisms of resistance to anti-PD1 immunotherapy |
Zeitschriftenartikel
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Elektronische Ressource
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2018
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Whither systems medicine? |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Cardiac cell therapies for the treatment of acute myocardial infarction: a meta-analysis from mouse studies |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Cardiac function improvement and bone marrow response - outcome analysis of the randomized PERFECT phase III clinical trial of intramyocardial CD133+ application after myocardial infarction: EBioMedicine, ISSN 2352-3964, ZDB-ID 2799017-5. - Amsterdam [u.a.] : Elsevier |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Comprehensive functional enrichment analysis of male infertility: Scientific reports, ISSN 2045-2322, ZDB-ID 2615211-3. - [London] : Macmillan Publishers Limited, part of Springer Nature |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Customized workflow development and data modularization concepts for RNA-Sequencing and metatranscriptome experiments: Journal of biotechnology, ISSN 1873-4863, ZDB-ID 2016476-2. - Amsterdam [u.a.] : Elsevier Science |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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(Epi)genetic inheritance in Schistosoma mansoni: a systems approach |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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FocusHeuristics: Scientific reports, ISSN 2045-2322, ZDB-ID 2615211-3. - [London] : Macmillan Publishers Limited, part of Springer Nature |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Identification of antineoplastic targets with systems approaches, using resveratrol as an in-depth case study |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Mammalian [gamma]2 AMPK regulates intrinsic heart rate: Nature Communications, ISSN 2041-1723, ZDB-ID 2553671-0. - [London] : Nature Publishing Group UK |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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An open-source solution for advanced imaging flow cytometry data analysis using machine learning: Methods : a companion to methods in enzymology. - Orlando, Fla : Academic Press |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy |
Zeitschriftenartikel
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Elektronische Ressource
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2017
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Unraveling a tumor type-specific regulatory core underlying E2F1-mediated epithelial-mesenchymal transition to predict receptor protein signatures |
Zeitschriftenartikel
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Elektronische Ressource
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2016
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An algorithm to detect and communicate the differences in computational models describing biological systems: Bioinformatics. - Oxford : Oxford Univ. Press |
Zeitschriftenartikel
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Druckschrift
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2016
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MicroRNA and transcription factor gene regulatory network analysis reveals key regulatory elements associated with prostate cancer progression |
Zeitschriftenartikel
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Elektronische Ressource
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2016
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Network-assisted disease classification and biomarker discovery: Systems Medicine |
Teil einer Monographie/eines Konferenzbandes
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Elektronische Ressource
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2016
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STON: BMC bioinformatics. - London : BioMed Central |
Zeitschriftenartikel
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Elektronische Ressource
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2016
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Systems Medicine |
Monographie
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Elektronische Ressource
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2015
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Annotation-based feature extraction from sets of SBML models: Journal of biomedical semantics. - London : BioMed Central |
Zeitschriftenartikel
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Elektronische Ressource
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2015
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A call for virtual experiments: Progress in biophysics and molecular biology : an international review journal. - Kidlington : Elsevier Science |
Zeitschriftenartikel
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Druckschrift
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2015
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Combining computational models, semantic annotations and simulation experiments in a graph database |
Zeitschriftenartikel
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Elektronische Ressource
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2014
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Annotation-based feature extraction from sets of SBML models |
Teil einer Monographie/eines Konferenzbandes
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Elektronische Ressource
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2014
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Cooperative gene regulation by microRNA pairs and their identification using a computational workflow: Nucleic acids research : NAR. - Oxford : Oxford Univ. Press |
Zeitschriftenartikel
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Druckschrift
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2014
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Enabling multiscale modeling in systems medicine: Genome medicine. - London : BioMed Central |
Zeitschriftenartikel
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Elektronische Ressource
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2014
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Glucose de-repression by yeast AMP-activated protein kinase SNF1 is controlled via at least two independent steps |
Zeitschriftenartikel
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Elektronische Ressource
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2014
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Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) |
Zeitschriftenartikel
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Elektronische Ressource
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2014
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The systems biology of mitochondrial fission and fusion and implications for disease and aging |
Zeitschriftenartikel
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Druckschrift
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2014
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Systems epidemiology: what's in a name? |
Zeitschriftenartikel
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Elektronische Ressource
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2014
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Tumors as chaotic attractors |
Zeitschriftenartikel
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Elektronische Ressource
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2013
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Analysing the impact of nucleo-cytoplasmic shuttling of beta-catenin and its antagonists APC, Axin and GSK3 on Wnt/beta-catenin signalling: Cellular signalling. - Amsterdam : Elsevier |
Zeitschriftenartikel
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Druckschrift
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2013
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Encyclopedia of systems biology |
Sonstiges
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Druckschrift
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2013
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Kinetic modeling-based detection of genetic signatures that provide chemoresistance via the E2F1-p73/DNp73-miR-205 network |
Zeitschriftenartikel
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Druckschrift
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2013
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MicroRNA cancer regulation |
Monographie
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Druckschrift
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2013
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Modelling molecular processes by individual-based simulations applied to actin polymerisation |
Teil einer Monographie/eines Konferenzbandes
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Elektronische Ressource
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2013
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Regulation of cell cycle checkpoint kinase WEE1 by miR-195 in malignant melanoma: Oncogene : an international journal. - Basingstoke : Nature Publ. Group |
Zeitschriftenartikel
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Druckschrift
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2013
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The role of theory and modeling in medical research: Frontiers in physiology. - Lausanne : Frontiers Research Foundation |
Zeitschriftenartikel
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Elektronische Ressource
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2013
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Simulations of stressosome activation emphasize allosteric interactions between RsbR and RsbT |
Zeitschriftenartikel
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Elektronische Ressource
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2013
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Tracing organizing principles: learning from the history of systems biology |
Zeitschriftenartikel
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Elektronische Ressource
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2013
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Web resources for microRNA research: MicroRNA cancer regulation |
Teil einer Monographie/eines Konferenzbandes
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Druckschrift
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2012
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E2F1 confers anticancer drug resistance by targeting ABC transporter family members and Bcl-2 via the p73/DNp73-miR-205 circuitry: Cell cycle. - Georgetown, Tex. : Landes Bioscience |
Zeitschriftenartikel
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Druckschrift
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2012
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Gene expression in low- and high-dose-irradiated human peripheral blood lymphocytes: possible applications for biodosimetry |
Zeitschriftenartikel
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Elektronische Ressource
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2012
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Multi-compartmental modeling of SORLA's influence on amyloidogenic processing in Alzheimer's disease |
Zeitschriftenartikel
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Elektronische Ressource
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2012
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Nonlinear modelling of curvature by bi-linear metamodelling |
Zeitschriftenartikel
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Elektronische Ressource
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2012
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The role of theorem proving in systems biology |
Zeitschriftenartikel
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Elektronische Ressource
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2012
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Systems biology and bioinformatics in aging research: Rejuvenation research : RR. - New Rochelle, NY : Liebert |
Zeitschriftenartikel
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Druckschrift
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2011
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Controlled vocabularies and semantics in systems biology: Molecular systems biology : the inaugural collection. - London : Nature Publ. Group |
Zeitschriftenartikel
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Druckschrift
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2011
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Minimum information about a simulation experiment (MIASE) |
Zeitschriftenartikel
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Elektronische Ressource
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2011
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Modeling of cellular processes: methods, data, and requirements |
Teil einer Monographie/eines Konferenzbandes
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Elektronische Ressource
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2011
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Modeling the Calvin-Benson cycle |
Zeitschriftenartikel
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Elektronische Ressource
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2011
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Nucleo-cytoplasmic shuttling of APC can maximize -catenin/TCF concentration |
Zeitschriftenartikel
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Elektronische Ressource
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2011
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Reproducible computational biology experiments with SED-ML |
Zeitschriftenartikel
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Elektronische Ressource
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2010
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The multikinase inhibitor Sorafenib displays significant antiproliferative effects and induces apoptosis via caspase 3, 7 and PARP in B- and T-lymphoblastic cells |
Zeitschriftenartikel
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Elektronische Ressource
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2010
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Optimization of biochemical systems through mathematical programming: Computers & operations research : and their applications to problems of world concern ; an international journal. - Oxford [u.a.] : Elsevier |
Zeitschriftenartikel
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Druckschrift
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2010
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Ranked retrieval of Computational Biology models |
Zeitschriftenartikel
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Elektronische Ressource
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2010
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Tumor-promoting role of signal transducer and activator of transcription (Stat)1 in late-stage melanoma growth: Clinical & experimental metastasis : official journal of the Metastasis Research Society. - Dordrecht : Springer |
Zeitschriftenartikel
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Druckschrift
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2009
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Report on EU - USA workshop: how systems biology can advance cancer research (27 October 2008) |
Zeitschriftenartikel
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Elektronische Ressource
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2009
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Time delay and Epo dose modulation in a multilevel model for erythropoiesis |
Zeitschriftenartikel
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Elektronische Ressource
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2009
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Time delay and protein modulation analysis in a model of RNA silencing |
Zeitschriftenartikel
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Elektronische Ressource
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2008
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Dynamic properties of a delayed protein cross talk model |
Zeitschriftenartikel
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Elektronische Ressource
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2008
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The role of dynamic stimulation pattern in the analysis of bistable intracellular networks |
Zeitschriftenartikel
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Elektronische Ressource
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2008
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Systems biology |
Monographie
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Druckschrift
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2007
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Bioinformatics analysis of interactions of receptor homodimers with intracellular protein homodimers |
Zeitschriftenartikel
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Druckschrift
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2007
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Chaos in a delayed protein cross talk model with periodic forcing |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Defining systems biology: an engineering perspective |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Detection of potential enzyme targets by metabolic modelling and optimization: application to a simple enzymopathy |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Interpreting Rosen |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Investigation of dynamic behaviour of receptor tyrosine kinase and protein tyrosine phospatase reaction network using mathematical model |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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PLMaddon: a power-law module for the Matlab SBToolbox |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Power-law models of signal transduction pathways |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Principal difference between stability and structural stability (robustness) as used in systems biology |
Zeitschriftenartikel
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Druckschrift
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2007
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A quasi-linear algorithm to estimate steady-states in power-law models of biochemical networks |
Zeitschriftenartikel
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Druckschrift
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2007
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SBML export interface for the systems biology toolbox for MATLAB |
Zeitschriftenartikel
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Elektronische Ressource
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2007
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Stability analysis of a time delay model for the JAK-STAT signaling pathway |
Zeitschriftenartikel
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Elektronische Ressource
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2006
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Perspectives of graph mining techniques |
Zeitschriftenartikel
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Druckschrift
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2005
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Clustering of unevenly sampled gene expression time-series data |
Zeitschriftenartikel
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Elektronische Ressource
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2005
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Driver identification of the Ras/Raf/MEK/ERK signal transduction pathway |
Zeitschriftenartikel
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Elektronische Ressource
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2005
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The dynamic systems approach to control and regulation of intracellular networks |
Zeitschriftenartikel
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Elektronische Ressource
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2005
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A hybrid systems framework for cellular processes |
Zeitschriftenartikel
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Elektronische Ressource
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2005
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Systembiologie des kanonischen Wnt-Signalweges: Labor-Praxis : mehr Effizienz für Labor und Analytik. - Würzburg : Vogel Business Media |
Zeitschriftenartikel
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Druckschrift
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2005
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A systems- and signal-oriented approach to intracellular dynamics |
Zeitschriftenartikel
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Elektronische Ressource
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