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Publikationen

IEF/IN/IFI/Systembiologie und Bioinformatik

Details ansehen zu: IEF/IN/IFI/Systembiologie und Bioinformatik
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2005 Systembiologie des kanonischen Wnt-Signalweges: Labor-Praxis : mehr Effizienz für Labor und Analytik. - Würzburg : Vogel Business Media Zeitschriftenartikel Druckschrift
2005 The dynamic systems approach to control and regulation of intracellular networks Zeitschriftenartikel Elektronische Ressource
2005 Clustering of unevenly sampled gene expression time-series data Zeitschriftenartikel Elektronische Ressource
2005 Driver identification of the Ras/Raf/MEK/ERK signal transduction pathway Zeitschriftenartikel Elektronische Ressource
2005 A systems- and signal-oriented approach to intracellular dynamics Zeitschriftenartikel Elektronische Ressource
2005 A hybrid systems framework for cellular processes Zeitschriftenartikel Elektronische Ressource
2006 Perspectives of graph mining techniques Zeitschriftenartikel Druckschrift
2007 PLMaddon: a power-law module for the Matlab SBToolbox Zeitschriftenartikel Elektronische Ressource
2007 SBML export interface for the systems biology toolbox for MATLAB Zeitschriftenartikel Elektronische Ressource
2007 Interpreting Rosen Zeitschriftenartikel Elektronische Ressource
2007 Detection of potential enzyme targets by metabolic modelling and optimization: application to a simple enzymopathy Zeitschriftenartikel Elektronische Ressource
2007 Power-law models of signal transduction pathways Zeitschriftenartikel Elektronische Ressource
2007 Principal difference between stability and structural stability (robustness) as used in systems biology Zeitschriftenartikel Druckschrift
2007 Investigation of dynamic behaviour of receptor tyrosine kinase and protein tyrosine phospatase reaction network using mathematical model Zeitschriftenartikel Elektronische Ressource
2007 A quasi-linear algorithm to estimate steady-states in power-law models of biochemical networks Zeitschriftenartikel Druckschrift
2007 Bioinformatics analysis of interactions of receptor homodimers with intracellular protein homodimers Zeitschriftenartikel Druckschrift
2007 Defining systems biology: an engineering perspective Zeitschriftenartikel Elektronische Ressource
2007 Chaos in a delayed protein cross talk model with periodic forcing Zeitschriftenartikel Elektronische Ressource
2007 Stability analysis of a time delay model for the JAK-STAT signaling pathway Zeitschriftenartikel Elektronische Ressource
2008 Systems biology Monographie Druckschrift
2008 Dynamic properties of a delayed protein cross talk model Zeitschriftenartikel Elektronische Ressource
2008 The role of dynamic stimulation pattern in the analysis of bistable intracellular networks Zeitschriftenartikel Elektronische Ressource
2009 Report on EU - USA workshop: how systems biology can advance cancer research (27 October 2008) Zeitschriftenartikel Elektronische Ressource
2009 Time delay and Epo dose modulation in a multilevel model for erythropoiesis Zeitschriftenartikel Elektronische Ressource
2009 Time delay and protein modulation analysis in a model of RNA silencing Zeitschriftenartikel Elektronische Ressource
2010 Optimization of biochemical systems through mathematical programming: Computers & operations research : and their applications to problems of world concern ; an international journal. - Oxford [u.a.] : Elsevier Zeitschriftenartikel Druckschrift
2010 Tumor-promoting role of signal transducer and activator of transcription (Stat)1 in late-stage melanoma growth: Clinical & experimental metastasis : official journal of the Metastasis Research Society. - Dordrecht : Springer Zeitschriftenartikel Druckschrift
2010 Ranked retrieval of Computational Biology models Zeitschriftenartikel Elektronische Ressource
2010 The multikinase inhibitor Sorafenib displays significant antiproliferative effects and induces apoptosis via caspase 3, 7 and PARP in B- and T-lymphoblastic cells Zeitschriftenartikel Elektronische Ressource
2011 Controlled vocabularies and semantics in systems biology: Molecular systems biology : the inaugural collection. - London : Nature Publ. Group Zeitschriftenartikel Druckschrift
2011 Modeling of cellular processes: methods, data, and requirements Teil einer Monographie/eines Konferenzbandes Elektronische Ressource
2011 Nucleo-cytoplasmic shuttling of APC can maximize -catenin/TCF concentration Zeitschriftenartikel Elektronische Ressource
2011 Modeling the Calvin-Benson cycle Zeitschriftenartikel Elektronische Ressource
2011 Reproducible computational biology experiments with SED-ML Zeitschriftenartikel Elektronische Ressource
2011 Minimum information about a simulation experiment (MIASE) Zeitschriftenartikel Elektronische Ressource
2012 Systems biology and bioinformatics in aging research: Rejuvenation research : RR. - New Rochelle, NY : Liebert Zeitschriftenartikel Druckschrift
2012 E2F1 confers anticancer drug resistance by targeting ABC transporter family members and Bcl-2 via the p73/DNp73-miR-205 circuitry: Cell cycle. - Georgetown, Tex. : Landes Bioscience Zeitschriftenartikel Druckschrift
2012 Nonlinear modelling of curvature by bi-linear metamodelling Zeitschriftenartikel Elektronische Ressource
2012 The role of theorem proving in systems biology Zeitschriftenartikel Elektronische Ressource
2012 Gene expression in low- and high-dose-irradiated human peripheral blood lymphocytes: possible applications for biodosimetry Zeitschriftenartikel Elektronische Ressource
2012 Multi-compartmental modeling of SORLA's influence on amyloidogenic processing in Alzheimer's disease Zeitschriftenartikel Elektronische Ressource
2013 Regulation of cell cycle checkpoint kinase WEE1 by miR-195 in malignant melanoma: Oncogene : an international journal. - Basingstoke : Nature Publ. Group Zeitschriftenartikel Druckschrift
2013 Analysing the impact of nucleo-cytoplasmic shuttling of beta-catenin and its antagonists APC, Axin and GSK3 on Wnt/beta-catenin signalling: Cellular signalling. - Amsterdam : Elsevier Zeitschriftenartikel Druckschrift
2013 The role of theory and modeling in medical research: Frontiers in physiology. - Lausanne : Frontiers Research Foundation Zeitschriftenartikel Elektronische Ressource
2013 Web resources for microRNA research: MicroRNA cancer regulation Teil einer Monographie/eines Konferenzbandes Druckschrift
2013 Kinetic modeling-based detection of genetic signatures that provide chemoresistance via the E2F1-p73/DNp73-miR-205 network Zeitschriftenartikel Druckschrift
2013 Encyclopedia of systems biology Sonstiges Druckschrift
2013 MicroRNA cancer regulation Monographie Druckschrift
2013 Modelling molecular processes by individual-based simulations applied to actin polymerisation Teil einer Monographie/eines Konferenzbandes Elektronische Ressource
2013 Tracing organizing principles: learning from the history of systems biology Zeitschriftenartikel Elektronische Ressource
2013 Simulations of stressosome activation emphasize allosteric interactions between RsbR and RsbT Zeitschriftenartikel Elektronische Ressource
2014 Enabling multiscale modeling in systems medicine: Genome medicine. - London : BioMed Central Zeitschriftenartikel Elektronische Ressource
2014 Cooperative gene regulation by microRNA pairs and their identification using a computational workflow: Nucleic acids research : NAR. - Oxford : Oxford Univ. Press Zeitschriftenartikel Druckschrift
2014 The systems biology of mitochondrial fission and fusion and implications for disease and aging Zeitschriftenartikel Druckschrift
2014 Glucose de-repression by yeast AMP-activated protein kinase SNF1 is controlled via at least two independent steps Zeitschriftenartikel Elektronische Ressource
2014 Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) Zeitschriftenartikel Elektronische Ressource
2014 Annotation-based feature extraction from sets of SBML models Teil einer Monographie/eines Konferenzbandes Elektronische Ressource
2014 Systems epidemiology: what's in a name? Zeitschriftenartikel Elektronische Ressource
2014 Tumors as chaotic attractors Zeitschriftenartikel Elektronische Ressource
2015 A call for virtual experiments: Progress in biophysics and molecular biology : an international review journal. - Kidlington : Elsevier Science Zeitschriftenartikel Druckschrift
2015 Annotation-based feature extraction from sets of SBML models: Journal of biomedical semantics. - London : BioMed Central Zeitschriftenartikel Elektronische Ressource
2015 Combining computational models, semantic annotations and simulation experiments in a graph database Zeitschriftenartikel Elektronische Ressource
2016 An algorithm to detect and communicate the differences in computational models describing biological systems: Bioinformatics. - Oxford : Oxford Univ. Press Zeitschriftenartikel Druckschrift
2016 STON: BMC bioinformatics. - London : BioMed Central Zeitschriftenartikel Elektronische Ressource
2016 Systems Medicine Monographie Elektronische Ressource
2016 Network-assisted disease classification and biomarker discovery: Systems Medicine Teil einer Monographie/eines Konferenzbandes Elektronische Ressource
2016 MicroRNA and transcription factor gene regulatory network analysis reveals key regulatory elements associated with prostate cancer progression Zeitschriftenartikel Elektronische Ressource
2017 An open-source solution for advanced imaging flow cytometry data analysis using machine learning: Methods : a companion to methods in enzymology. - Orlando, Fla : Academic Press Zeitschriftenartikel Elektronische Ressource
2017 Mammalian [gamma]2 AMPK regulates intrinsic heart rate: Nature Communications, ISSN 2041-1723, ZDB-ID 2553671-0. - [London] : Nature Publishing Group UK Zeitschriftenartikel Elektronische Ressource
2017 Comprehensive functional enrichment analysis of male infertility: Scientific reports, ISSN 2045-2322, ZDB-ID 2615211-3. - [London] : Macmillan Publishers Limited, part of Springer Nature Zeitschriftenartikel Elektronische Ressource
2017 FocusHeuristics: Scientific reports, ISSN 2045-2322, ZDB-ID 2615211-3. - [London] : Macmillan Publishers Limited, part of Springer Nature Zeitschriftenartikel Elektronische Ressource
2017 Customized workflow development and data modularization concepts for RNA-Sequencing and metatranscriptome experiments: Journal of biotechnology, ISSN 1873-4863, ZDB-ID 2016476-2. - Amsterdam [u.a.] : Elsevier Science Zeitschriftenartikel Elektronische Ressource
2017 Cardiac function improvement and bone marrow response - outcome analysis of the randomized PERFECT phase III clinical trial of intramyocardial CD133+ application after myocardial infarction: EBioMedicine, ISSN 2352-3964, ZDB-ID 2799017-5. - Amsterdam [u.a.] : Elsevier Zeitschriftenartikel Elektronische Ressource
2017 (Epi)genetic inheritance in Schistosoma mansoni: a systems approach Zeitschriftenartikel Elektronische Ressource
2017 Identification of antineoplastic targets with systems approaches, using resveratrol as an in-depth case study Zeitschriftenartikel Elektronische Ressource
2017 Unraveling a tumor type-specific regulatory core underlying E2F1-mediated epithelial-mesenchymal transition to predict receptor protein signatures Zeitschriftenartikel Elektronische Ressource
2017 The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy Zeitschriftenartikel Elektronische Ressource
2017 Cardiac cell therapies for the treatment of acute myocardial infarction: a meta-analysis from mouse studies Zeitschriftenartikel Elektronische Ressource
2018 Model-based phenotypic signatures governing the dynamics of the stem and semi-differentiated cell populations in dysplastic colonic crypts: Bulletin of mathematical biology, ISSN 1522-9602, ZDB-ID 1462512-x. - New York, NY : Springer Zeitschriftenartikel Elektronische Ressource
2018 A systematic survey of centrality measures for protein-protein interaction networks: BMC systems biology, ISSN 1752-0509, ZDB-ID 2265490-2. - London : BioMed Central Zeitschriftenartikel Elektronische Ressource
2018 Identifying frequent patterns in biochemical reaction networks: a workflow: Database : the journal of biological databases and curation, ISSN 1758-0463, ZDB-ID 2496706-3. - Oxford : Oxford University Press Zeitschriftenartikel Elektronische Ressource
2018 Mathematical analysis of the influence of brain metabolism on the BOLD signal in Alzheimer's disease Zeitschriftenartikel Elektronische Ressource
2018 A network-based integrative workflow to unravel mechanisms underlying disease progression Teil einer Monographie/eines Konferenzbandes Elektronische Ressource
2018 MiR-205-5p and miR-342-3p cooperate in the repression of the E2F1 transcription factor in the context of anticancer chemotherapy resistance Zeitschriftenartikel Elektronische Ressource
2018 Diagnostic potential of imaging flow cytometry Zeitschriftenartikel Elektronische Ressource
2018 Impact of graphene-based nanomaterials (GBNMs) on the structural and functional conformations of hepcidin peptide Zeitschriftenartikel Elektronische Ressource
2018 Quick tips for creating effective and impactful biological pathways using the Systems Biology Graphical Notation Zeitschriftenartikel Elektronische Ressource
2018 Unveiling network-based functional features through integration of gene expression into protein networks Zeitschriftenartikel Elektronische Ressource
2018 A web platform for the network analysis of high-throughput data in melanoma and its use to investigate mechanisms of resistance to anti-PD1 immunotherapy Zeitschriftenartikel Elektronische Ressource
2018 Evolution of computational models in BioModels Database and the Physiome Model Repository Zeitschriftenartikel Elektronische Ressource
2018 Whither systems medicine? Zeitschriftenartikel Elektronische Ressource
2018 Specifications of standards in systems and synthetic biology: status and developments in 2017 Zeitschriftenartikel Elektronische Ressource
2018 The Systems Biology Markup Language (SBML): language specification for level 3 version 1 core Zeitschriftenartikel Elektronische Ressource
2018 The Systems Biology Markup Language (SBML) Zeitschriftenartikel Elektronische Ressource
2018 Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3) Zeitschriftenartikel Elektronische Ressource
2019 Harmonizing semantic annotations for computational models in biology Zeitschriftenartikel Elektronische Ressource
2021 Personalized cell therapy for patients with peripheral arterial diseases in the context of genetic alterations Zeitschriftenartikel Elektronische Ressource
2022 A new perspective on teaching the natural exponential to engineering students Zeitschriftenartikel Elektronische Ressource
2022 Cross-tissue transcriptome-wide association studies identify susceptibility genes shared between schizophrenia and inflammatory bowel disease Zeitschriftenartikel Elektronische Ressource
2022 The prognostic and predictive role of xeroderma pigmentosum gene expression in Melanoma Zeitschriftenartikel Elektronische Ressource
2022 Computational models for clinical applications in personalized medicine Zeitschriftenartikel Elektronische Ressource
2022 Monitoring the maturation of the sarcomere network Zeitschriftenartikel Elektronische Ressource
2022 Attention retrieval model for entity relation extraction from biological literature Zeitschriftenartikel Elektronische Ressource
2022 Hamiltonian cycles in annular decomposable Barnette graphs Zeitschriftenartikel Elektronische Ressource
2023 Exploring thiazolopyridine AV25R Zeitschriftenartikel Elektronische Ressource