Publikation: Zeitschriftenartikel

A parallel and distributed discrete event approach for spatial cell-biological simulations

Grunddaten
Abstract
Autoren
Einrichtung

Grunddaten

Titel	A parallel and distributed discrete event approach for spatial cell-biological simulations
Veröffentlicht in	Performance evaluation review : PER ; a publication of the ACM Special Interest Group on Measurement and Evaluation, SIGMETRICS. - New York, NY : ACM
Erscheinungsjahr	2008
Seiten (von – bis)	22 – 31
Band	35
Heft-Nr.	4
Jahr	2008
Publikationsform	Druckschrift
Publikationsart	Zeitschriftenartikel
Sprache	Englisch
Letzte Änderung	17.05.2019 14:07:15
Bearbeitungsstatus	durch UB Rostock abschließend validiert
Dauerhafte URL	http://purl.uni-rostock.de/fodb/pub/30926
Links zu Katalogen

Abstract

As data and knowledge about cell-biological systems increases so does the need for simulation tools to support a hypothesis driven wet-lab experimentation. Discrete event simulation has received a lot of attention lately, however, often its application is hampered by its lack on performance. One solution are parallel, distributed approaches, however, their application is limited by the amount of parallelism available in the model. Recent studies have shown that spatial aspects are crucial for cell biological dynamics and they are also a promising candidate to exploit parallelism. Promises and specific requirements imposed by a spatial simulation of cell biological systems will be illuminated by a parallel and distributed variant of the Next-Subvolume Method (NSM), which augments the Stochastic Simulation Algorithm (SSA) with spatial features, and its realization in a grid-inspired simulation system called Aurora.

Autoren

Jeschke, Matthias
Ewald, Roland
Park, Alfred
Fujimoto, Richard
Uhrmacher, Adelinde

Einrichtung

IEF/Bereich Informatik